Motif HL_16568.1 Version HL_16568.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-3 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6CZR_102 | 6CZR | 0.9009 | 1 | 1a | SSU rRNA | C | 1430 | U | 1431 | A | 1432 | C | 1433 | G | 1435 | ntSH | cWW |
| 2 | HL_2IZN_001 | 2IZN | 0.1797 | 1 | R | RNA (19-mer) | G | 8||||P_1 | A | 9||||P_1 | U | 10||||P_1 | U | 11||||P_1 | C | 13||||P_1 | cWW | |
| 3 | HL_1U1Y_001 | 1U1Y | 0.0797 | 1 | R | RNA (17-mer) | G | 7||||P_1 | A | 8||||P_1 | U | 9||||P_1 | C | 10||||P_1 | C | 12||||P_1 | cWW | |
| 4 | HL_5MSF_001 | 5MSF | 0.0000 | 1 | R | RNA (18-mer) | G | 7||||P_1 | A | 8||||P_1 | U | 9||||P_1 | C | 10||||P_1 | C | 12||||P_1 | cWW | |
| 5 | HL_7MSF_001 | 7MSF | 0.2456 | 1 | R | RNA (14-mer) | C | 5||||P_1 | A | 6||||P_1 | A | 7||||P_1 | C | 8||||P_1 | G | 10||||P_1 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUCAC | 2 |
| CUACGG | 1 |
| GAUUAC | 1 |
| CAACAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUCA | 2 |
| UACG | 1 |
| AUUA | 1 |
| AACA | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: