Motif HL_17243.1 Version HL_17243.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 3-7 | 4-5 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3FO4_003 | 3FO4 | 0.0000 | 0 | A | Guanine riboswitch C74U mutant | A | 59 | C | 60 | C | 61 | G | 62 | U | 63 | A | 64 | A | 65 | A | 66 | U | 67 | cWW | cSW | cSH |
| 2 | HL_1Y26_003 | 1Y26 | 0.1348 | 0 | X | Purine riboswitch | G | 59 | C | 60 | C | 61 | U | 62 | U | 63 | A | 64 | A | 65 | A | 66 | C | 67 | cWW | cSW | |
| 3 | HL_3LA5_003 | 3LA5 | 0.3905 | 0 | A | Purine riboswitch | G | 59 | C | 60 | C | 61 | U | 62 | U | 63 | A | 64 | A | 65 | A | 66 | C | 67 | cWW | cSW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCUUAAAC | 2 |
| ACCGUAAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCUUAAA | 2 |
| CCGUAAA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_17243.1 | Only in the child motif |
|---|---|---|---|
| HL_66174.1 Compare | HL_1Y26_003, HL_3FO4_003, HL_3LA5_003 | HL_3RKF_003, HL_2CZJ_001 |
Coloring options: