Motif HL_17790.1 Version HL_17790.1 of this group appears in releases 1.5 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4AQ7_002 | 4AQ7 | 0.0000 | 1 | Mini UNCG | B | tRNA | G | 47|||A | C | 47|||D | C | 47|||F | cWW |
| 2 | HL_1WZ2_007 | 1WZ2 | 1.0729 | 3 | D | tRNA | C | 950 | G | 951 | G | 955 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGC | 1 |
| CGUAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CG | 1 |
| GUAG | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_17790.1 | Only in the parent motif |
|---|---|---|---|
| HL_18798.1 Compare | HL_4AQ7_002 | HL_1WZ2_007 | HL_1ZBH_001, HL_4HXH_001, HL_3U5H_004 |
| HL_82253.2 Compare | HL_1WZ2_007 | HL_4AQ7_002 | HL_3OWZ_004, HL_1S72_003 |
Children motifs
| Child motif | Common motif instances | Only in HL_17790.1 | Only in the child motif |
|---|---|---|---|
| HL_65386.1 Compare | HL_4AQ7_002 | HL_1WZ2_007 | HL_4CUV_078 |
| HL_21695.1 Compare | HL_1WZ2_007 | HL_4AQ7_002 |
- Annotations
-
- (1)
- Mini UNCG (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 1.07 | Avg 0.54 | Max 1.07
Coloring options: