Motif HL_19337.2 Version HL_19337.2 of this group appears in releases 3.12 to 3.31
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2PJP_001 | 2PJP | 0.8723 | 0 | B | SECIS RNA | G | 22 | G | 23 | U | 24 | C | 25 | cWW |
| 2 | HL_4ILL_001 | 4ILL | 0.7494 | 3 | R | RNA (24-mer) | U | 8 | C | 10 | A | 12 | A | 14 | cWW |
| 3 | HL_6FQ3_001 | 6FQ3 | 0.0427 | 1 | B | RNA (13-mer) | U | 5 | C | 7 | A | 8 | A | 9 | cWW |
| 4 | HL_6FQL_001 | 6FQL | 0.0000 | 1 | B | RNA (13-mer) | U | 5 | U | 7 | A | 8 | A | 9 | cWW |
| 5 | HL_5TBW_045 | 5TBW | 0.2929 | 1 | 1 | LSU rRNA | G | 2110 | U | 2112 | A | 2113 | C | 2114 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUC | 1 |
| UACUAUA | 1 |
| UCCAA | 1 |
| UUUAA | 1 |
| GGUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GU | 1 |
| ACUAU | 1 |
| CCA | 1 |
| UUA | 1 |
| GUA | 1 |
Release history
| Release | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: