#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 91-92-83-53-63-7
1 HL_5X2G_0025X2G0.92262BsgRNAG54U56U57G58C59G60G61G62C64cWWncSH
2 HL_5J7L_1345J7L0.77921DA LSU rRNAU59G60U62A63A64U65C66U67G68cWWncSH
3 HL_5J8B_1185J8B0.00000w tRNAA31PSU32U33G34A35A36MIA37A38PSU39cWW
4 HL_1VTQ_0021VTQ0.39150AT-RNA-ASPC31PSU32U33G34U35C361MG37C38G39cWWntSHa
5 HL_4LVW_0014LVW0.74134ATHF riboswitchA33A34U35A39U40G41U42G44U45cWWcWWtWH

3D structures

Complete motif including flanking bases
SequenceCounts
GUUUGCGGGAC1
UGCUAAUCUG1
A(PSU)UGAA(MIA)A(PSU)1
CUGUCCG1
AAUGGGAUGUCGU1
Non-Watson-Crick part of the motif
SequenceCounts
UUUGCGGGA1
GCUAAUCU1
(PSU)UGAA(MIA)A1
(PSU)UGUC(1MG)C1
AUGGGAUGUCG1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-F-F-F-F-F-F-F
    Heat map statistics
    Min 0.39 | Avg 0.61 | Max 0.95
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