#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4 5 6 7 81-82-73-6
1 HL_2DU3_0042DU30.81673D tRNAA912||||4_555G913||||4_555A914||||4_555G915||||4_555G916||||4_555U920||||4_555U921||||4_555U922||||4_555cWWntSH
2 HL_2DU3_0012DU30.81673D tRNAA912G913A914G915G916U920U921U922cWWntSH
3 HL_5E6M_0015E6M0.12433C tRNAG12U13A14G15U16A21U22C23cWWcwWcWS
4 HL_4QEI_0044QEI0.00003C tRNAG12||||2_555U13||||2_555A14||||2_555G15||||2_555U16||||2_555A21||||2_555U22||||2_555C23||||2_555cWWcwWcWS
5 HL_4QEI_0014QEI0.00003C tRNAG12U13A14G15U16A21U22C23cWWcwWcWS

3D structures

Complete motif including flanking bases
SequenceCounts
GUAGUGGUAUC3
AGAGGGGCUUU2
Non-Watson-Crick part of the motif
SequenceCounts
UAGUGGUAU3
GAGGGGCUU2

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-cWW-cWS-R-R
    Heat map statistics
    Min 0.12 | Avg 0.41 | Max 0.82
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