Motif HL_20030.1 Version HL_20030.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V5O_060 | 4V5O | 0.0000 | 1 | BA | SSU rRNA | G | 1160 | A | 1161 | C | 1162 | U | 1163 | C | 1164 | A | 1165 | A | 1166 | C | 1167 | C | 1169 | cWW |
| 2 | HL_4V88_212 | 4V88 | 0.3708 | 1 | A6 | SSU rRNA | G | 1188 | A | 1189 | C | 1190 | U | 1191 | C | 1192 | A | 1193 | A | 1194 | C | 1195 | C | 1197 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACUCAACAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACUCAACA | 2 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.37 | Avg 0.19 | Max 0.37
Coloring options: