Motif HL_20146.1 Version HL_20146.1 of this group appears in releases 3.77 to 3.87
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_4V9F_059 | 4V9F | 0.4319 | 5 | 0 | LSU rRNA | U | 2389 | U | 2390 | C | 2391 | G | 2397 | A | 2398 | G | 2399 | cWW | tSH | tHH | |
2 | HL_4PQV_003 | 4PQV | 0.0000 | 1 | A | Flavivirus 3' UTR stem loop IV | G | 57 | G | 58 | A | 59 | G | 61 | A | 62 | C | 63 | cWW | tSH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUCCCAACGAG | 1 |
GGAGGAC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UCCCAACGA | 1 |
GAGGA | 1 |
Release history
Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.Coloring options: