Motif HL_20482.1 Version HL_20482.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V9F_038 | 4V9F | 0.4958 | 3 | 0 | LSU rRNA | G | 1557 | C | 1558 | A | 1559 | G | 1563 | C | 1564 | cWW | ncWW | |
| 2 | HL_5TBW_037 | 5TBW | 0.0000 | 4 | 1 | LSU rRNA | G | 1680 | U | 1681 | U | 1682 | U | 1686 | U | 1688 | cWW | ||
| 3 | HL_7RQB_031 | 7RQB | 0.6054 | 2 | 1A | LSU rRNA | G | 1171 | G | 1173 | A | 1174 | A | 1177 | C | 1178 | cWW | tsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAUUCGC | 1 |
| GUUAUCUUU | 1 |
| GGAUGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAUUCG | 1 |
| UUAUCUU | 1 |
| GAUGA | 1 |
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