Motif HL_21675.2 Version HL_21675.2 of this group appears in releases 1.8 to 1.8
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4A1B_002 | 4A1B | 0.7078 | 1 | 1 | U | 67 | A | 68 | A | 69 | C | 70 | A | 72 | cWW | ncSH |
| 2 | HL_3V2F_007 | 3V2F | 0.0000 | 1 | A | A | 225 | G | 226 | A | 227 | A | 228 | U | 230 | cWW | |
| 3 | HL_1S72_007 | 1S72 | 0.3049 | 2 | 0 | C | 195 | G | 196 | A | 198 | A | 199 | G | 201 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAACUA | 1 |
| AGAAAU | 1 |
| CGCAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACU | 1 |
| GAAA | 1 |
| GCAAU | 1 |
Release history
| Release | 1.8 |
|---|---|
| Date | 2013-11-04 |
| Status | Updated, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in HL_21675.2 | Only in the parent motif |
|---|---|---|---|
| HL_21675.1 Compare | HL_3V2F_007, HL_1S72_007 | HL_4A1B_002 | HL_4IOA_007 |
| HL_26143.1 Compare | HL_4A1B_002 | HL_3V2F_007, HL_1S72_007 | HL_3U5H_002 |
Children motifs
| Child motif | Common motif instances | Only in HL_21675.2 | Only in the child motif |
|---|---|---|---|
| HL_21675.3 Compare | HL_1S72_007, HL_4A1B_002 | HL_3V2F_007 | |
| HL_82538.1 Compare | HL_3V2F_007 | HL_1S72_007, HL_4A1B_002 | HL_4C9D_002, HL_4A1C_003, HL_4IOA_007, HL_3U5H_076 |
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