Motif HL_22654.1 Version HL_22654.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2AW7_001 | 2AW7 | 0.0000 | 0 | A | 16S ribosomal RNA | U | 12 | U | 13 | U | 14 | G | 15 | A | 16 | U | 17 | C | 18 | A | 19 | U | 20 | G | 21 | G | 22 | cWW | tHW |
| 2 | HL_2XZM_001 | 2XZM | 0.1166 | 0 | A | 18S RRNA | G | 7 | U | 8 | U | 9 | G | 10 | A | 11 | U | 12 | C | 13 | C | 14 | U | 15 | G | 16 | C | 17 | cWW | ntWH |
| 3 | HL_3O30_001 | 3O30 | 0.2960 | 0 | 1 | 18S ribosomal RNA | G | 7 | U | 8 | U | 9 | G | 10 | A | 11 | U | 12 | C | 13 | C | 14 | U | 15 | G | 16 | C | 17 | cWW | ntHW |
| 4 | HL_1FJG_001 | 1FJG | 0.3536 | 0 | A | SSU rRNA | U | 12 | U | 13 | U | 14 | G | 15 | A | 16 | U | 17 | C | 18 | C | 19 | U | 20 | G | 21 | G | 22 | cWW | tHW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGAUCCUGC | 2 |
| UUUGAUCAUGG | 1 |
| UUUGAUCCUGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGAUCCUG | 3 |
| UUGAUCAUG | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_22654.1 | Only in the child motif |
|---|---|---|---|
| HL_19261.1 Compare | HL_1FJG_001, HL_2XZM_001 | HL_2AW7_001, HL_3O30_001 | HL_2JLT_001, HL_3U5F_001, HL_3T4B_003 |
| HL_27831.1 Compare | HL_2AW7_001 | HL_1FJG_001, HL_2XZM_001, HL_3O30_001 |
Coloring options: