Motif HL_22971.1 Version HL_22971.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V8P_176 | 4V8P | 0.0000 | 1 | F1 | LSU rRNA | G | 710 | U | 711 | G | 712 | G | 713 | A | 714 | A | 715 | A | 717 | A | 718 | C | 719 | cWW | ncWW | tSH |
| 2 | HL_3J7P_087 | 3J7P | 0.9545 | 2 | S2 | SSU rRNA | C | 496 | C | 497 | C | 498 | G | 499 | A | 500 | C | 501 | G | 504 | G | 505 | G | 506 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGGAAAAAC | 1 |
| CCCGACCCGGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGGAAAAA | 1 |
| CCGACCCGG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSH-R-R-R
- Heat map statistics
- Min 0.95 | Avg 0.48 | Max 0.95
Coloring options: