Motif HL_25857.1 Version HL_25857.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1Y0Q_006 | 1Y0Q | 0.0000 | 1 | A | Group I catalytic intron | C | 171 | U | 172 | C | 174 | U | 175 | A | 176 | G | 177 | ncWW | |
| 2 | HL_2HOJ_001 | 2HOJ | 0.8477 | 4 | A | thi-box riboswitch | C | 23 | C | 24 | G | 33 | A | 34 | A | 35 | G | 36 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUCUAG | 1 |
| CCUCGUGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCUA | 1 |
| CUCGUGAA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_25857.1 | Only in the child motif |
|---|---|---|---|
| HL_29503.1 Compare | HL_1Y0Q_006 | HL_2HOJ_001 |
Coloring options: