Motif HL_29129.2 Version HL_29129.2 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7U4A_002 | 7U4A | 0.0000 | 2 | A | RNA (70-MER) | U | 28 | U | 29 | G | 31 | G | 32 | G | 33 | G | 34 | A | 35 | A | 36 | G | 38 | cWW | tWH |
| 2 | HL_5TPY_005 | 5TPY | 0.2201 | 2 | A | RNA (71-MER) | U | 28 | U | 29 | G | 31 | G | 32 | G | 33 | G | 34 | A | 35 | A | 36 | G | 38 | cWW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUGGGGAAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGGGGAAA | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Heat map statistics
- Min 0.22 | Avg 0.11 | Max 0.22
Coloring options: