#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 101-102-93-83-94-7
1 HL_6CZR_1016CZR0.193921a SSU rRNAG1338A1339U1340C1341A1342G1343C1344A1346G1348C1349cWWtWW
2 HL_4LFB_0304LFB0.00002A SSU rRNAG1356A1357U1358C1359A1360G1361C1361|||AA1363G1365C1366cWWcWWtWW
3 HL_5J7L_0295J7L0.14711AA SSU rRNAG1356A1357U1358C1359A1360G1361A1362A1363G1365C1366cWWcWWntWH
4 HL_4WSM_2514WSM0.824401K tRNAC47C48C49A50A51U52A53G54G55G56ncWWncWWntSH
5 HL_4V7M_0394V7M0.72771AY tRNAG29A30U31U32G33U34G35U37U38C39ncWWncWHncwW
6 HL_4WT8_2464WT80.86541C3 tRNAG30A31U32U33A35A36A37A38U39C40ncWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUCAGCCAUGC2
GAUCAGAAUGC1
CCCAAUAGGG1
GAUUGUGAUUC1
GAUUGAAAAUC1
Non-Watson-Crick part of the motif
SequenceCounts
AUCAGCCAUG2
AUCAGAAUG1
CCAAUAGG1
AUUGUGAUU1
AUUGAAAAU1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (6)
  • Basepair signature
    cWW-F-F-F-F-F-F-F-F
    Heat map statistics
    Min 0.15 | Avg 0.55 | Max 0.98
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