Motif HL_33817.1 Version HL_33817.1 of this group appears in releases 3.80 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8C3A_021 | 8C3A | 0.0000 | 2 | 1 | LSU rRNA | G | 906 | C | 907 | G | 908 | A | 910 | A | 911 | A | 913 | C | 914 | cWW | cWW | tSW |
| 2 | HL_5TBW_021 | 5TBW | 0.0931 | 2 | 1 | LSU rRNA | G | 910 | C | 911 | G | 912 | A | 914 | A | 915 | A | 917 | C | 918 | cWW | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGAAAGAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAAAGA | 2 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSW-F-F
- Heat map statistics
- Min 0.09 | Avg 0.05 | Max 0.09
Coloring options: