#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 91-92-8
1 HL_5E81_2355E810.349901K tRNAA31C32U33U8U34U35U36T6A37A38PSU39cWWncWW
2 HL_4WSM_2094WSM0.138601K tRNAC32U33U34G35A36G371MG38PSU39G40cWW
3 HL_1N32_0331N320.00000YANTICODON STEM-LOOP OF LEU-2 TRANSFER RNAC31U32U33G34A35G36G37PSU38G39cWW
4 HL_4P5J_0024P5J0.56990Anticodon loop relatedAtRNA-like 3' UTR elementC25U26C27G28A29C30A31C32G33cWW
5 HL_387D_001387D0.72531ARNA PseudoknotG4A5A6U8G9C10A11A12C13cWWtWW
6 HL_3PDR_0033PDR0.74161XM-box riboswitch (ykoK leader)G127A128U129C131U132U133G134U135C136cWW
7 HL_6XKO_0036XKO0.79191APreQ1-III riboswitchG63C64U65G67C68G69G70U71C72cWW

3D structures

Complete motif including flanking bases
SequenceCounts
ACU(U8U)UU(T6A)A(PSU)1
CUUGAGG1
CUUGAGG(PSU)G1
CUCGACACG1
GAAGUGCAAC1
GAUGCUUGUC1
GCUGGCGGUC1
Non-Watson-Crick part of the motif
SequenceCounts
CU(U8U)UU(T6A)A1
UUGAG(1MG)(PSU)1
UUGAGG(PSU)1
UCGACAC1
AAGUGCAA1
AUGCUUGU1
CUGGCGGU1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (6)
  • Anticodon loop related (1)
  • Basepair signature
    cWW-F-F-F-F-F-F-F
    Heat map statistics
    Min 0.14 | Avg 0.52 | Max 0.79
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