#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 111-112-103-83-93-104-7
1 HL_7A0S_0287A0S0.60633X LSU rRNAG1074C1075U1076U1077A1078G1079A1080A1084G1085C1086C1087cWWncSWntSH
2 HL_7MKY_0017MKY0.60931ARNA (66-MER)G9U10G11C12||AA13G14C15C16C17G18C20cWWcBW
3 HL_4UYK_0014UYK0.43600RSRP RNAG21G22U23U24C25G26G27C28G29U30C31cWW
4 HL_7K16_0027K160.34340PRNA (51-MER)G27C28U29U30G31A32G33A34A35C36C37cWWncWB
5 HL_5IB8_2085IB80.000001L tRNAG30A31C32U33U34U35U36A37A38U39C40cWWntSH
6 HL_6GSL_2386GSL0.453603L tRNAG31G32C33U34A35C36G37A38A39C40C41ncWWncWw
7 HL_6GSK_2186GSK0.469903L tRNAC30C31U32U33G34G35U36A37A38G39G40cWWncSWntSH
8 HL_4WSM_2254WSM0.510003L tRNAC31C32U33U34G35A36G37G38U39G40G41cWWcSW
9 HL_6DME_0036DME0.57690AppGpp RiboswitchG78G79A80U81A82A83A84A85G86A87C88cWWcWWtWHtWH

3D structures

Complete motif including flanking bases
SequenceCounts
GCUUAGAAGCAGCC1
GUGCAGCCCGUC1
GGUUCGGCGUC1
GCUUGAGAACC1
GACUUUUAAUC1
GGCUACGAACC1
CCUUGGUAAGG1
CCUUGAGGUGG1
GGAUAAAAGAC1
Non-Watson-Crick part of the motif
SequenceCounts
CUUAGAAGCAGC1
UGCAGCCCGU1
GUUCGGCGU1
CUUGAGAAC1
ACUUUUAAU1
GCUACGAAC1
CUUGGUAAG1
CUUGAGGUG1
GAUAAAAGA1

Release history

Release3.88
Date2024-09-11
StatusUpdated, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (9)
  • Basepair signature
    cWW-F-F-F-F-F-F-F-F-F
    Heat map statistics
    Min 0.34 | Avg 0.52 | Max 0.96
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