Motif HL_36982.1 Version HL_36982.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4QIL_002 | 4QIL | 0.0704 | 2 | Mini UNCG | C | RNA (19-mer) | C | 8 | G | 10 | G | 12 | cWW |
| 2 | HL_4Z31_001 | 4Z31 | 0.0524 | 2 | Mini UNCG | E | RNA (15-mer) | C | 6 | G | 8 | G | 10 | cWW |
| 3 | HL_4ZLD_001 | 4ZLD | 0.0000 | 2 | Mini UNCG | B | RNA (17-mer) | C | 7 | G | 9 | G | 11 | cWW |
| 4 | HL_4QI2_003 | 4QI2 | 0.1018 | 2 | Mini UNCG | G | RNA (23-mer) | C | 10 | G | 12 | G | 14 | cWW |
| 5 | HL_4TUW_002 | 4TUW | 0.2776 | 3 | Mini UNCG | C | HISTONE MRNA 3' STEM LOOP | U | 13 | U | 16 | A | 18 | cWW |
| 6 | HL_4QOZ_001 | 4QOZ | 0.2535 | 3 | Mini UNCG | A | histone mRNA stem-loop | U | 11 | U | 14 | A | 16 | cWW |
| 7 | HL_1ZBH_001 | 1ZBH | 0.2863 | 3 | Mini UNCG | F | RNA (20-mer) | U | 11 | U | 14 | A | 16 | cWW |
| 8 | HL_2UWM_002 | 2UWM | 0.5602 | 1 | D | RNA (23-mer) | G | 22 | U | 24 | C | 25 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGUG | 4 |
| UUUUCA | 3 |
| GGUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGU | 4 |
| UUUC | 3 |
| GU | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG (7)
- (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.05 | Avg 0.27 | Max 0.61
Coloring options: