Motif HL_37101.1 Version HL_37101.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2CSX_001 | 2CSX | 0.0000 | 5 | tRNA D-loop | C | RNA (75-MER) | C | 13 | A | 14 | G | 15 | C | 16 | U | 17 | G | 22 | cWW |
| 2 | HL_1QU2_001 | 1QU2 | 0.4621 | 5 | tRNA D-loop | T | tRNA | C | 13 | A | 14 | G | 15 | G | 16 | U | 17 | G | 22 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCUGGUCAG | 1 |
| CAGGUGGUUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCUGGUCA | 1 |
| AGGUGGUUA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA D-loop (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.46 | Avg 0.23 | Max 0.46
Coloring options: