Motif HL_38243.1 Version HL_38243.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2W2H_001 | 2W2H | 0.7695 | 1 | R | RNA (21-mer) | U | 10 | C | 12 | U | 13 | G | 14 | C | 15 | G | 16 | G | 17 | ncWW | ||
| 2 | HL_7A0S_021 | 7A0S | 0.0000 | 1 | X | LSU rRNA | C | 651 | C | 652 | G | 653 | A | 655 | U | 656 | A | 657 | G | 658 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUCUGCGG | 1 |
| CCGAAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUGCG | 1 |
| CGAAUA | 1 |
- Annotations
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.77 | Avg 0.38 | Max 0.77
Coloring options: