Motif HL_40442.1 Version HL_40442.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-7 | 2-8 | 3-9 | 6-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6XJQ_001 | 6XJQ | 0.0000 | 4 | A | Self-alkylating ribozyme (58-MER) | C | 23 | U | 25 | G | 26 | C | 27 | C | 28 | C | 29 | G | 30 | U | 34 | C | 35 | G | 36 | cWW | tSW | cWw | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUGCCCGUUAUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGCCCGUUAUC | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSW-cWW-cWS-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: