Motif HL_42161.1 Version HL_42161.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 2-16 | 3-15 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4BPP_019 | 4BPP | 0 | 0 | A | 18S RRNA | C | 808 | A | 809 | U | 810 | U | 811 | U | 812 | U | 813 | A | 814 | U | 815 | U | 816 | G | 817 | G | 818 | U | 819 | U | 820 | C | 821 | U | 822 | U | 823 | G | 824 | cWW | cWW | cwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUUUAUUGGUUCUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUUUAUUGGUUCUU | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-09 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_42161.1 | Only in the parent motif |
|---|---|---|---|
| HL_15701.1 Compare | HL_4BPP_019 | HL_1VWW_060, HL_1VX2_018 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-cWW-R-R-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: