Motif HL_42687.4 Version HL_42687.4 of this group appears in releases 1.8 to 1.9
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_361D_001 | 361D | 0.8970 | 1 | A | G | 86 | G | 87 | C | 88 | A | 89|||A | C | 90 | cWW | ntSH |
| 2 | HL_1GID_003 | 1GID | 0.0000 | 2 | A | G | 234 | A | 235 | U | 236 | U | 239 | C | 240 | cWW | ncWW |
| 3 | HL_1GID_006 | 1GID | 0.0077 | 2 | B | G | 234 | A | 235 | U | 236 | U | 239 | C | 240 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUCUUC | 2 |
| GGCGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUCUU | 2 |
| GCGA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in HL_42687.4 | Only in the parent motif |
|---|---|---|---|
| HL_42687.3 Compare | HL_1GID_006, HL_1GID_003 | HL_361D_001 | HL_4IOA_037 |
| HL_76766.2 Compare | HL_361D_001 | HL_1GID_006, HL_1GID_003 | HL_3EPH_002, HL_2ZM5_002 |
Children motifs
| Child motif | Common motif instances | Only in HL_42687.4 | Only in the child motif |
|---|---|---|---|
| HL_86115.1 Compare | HL_1GID_006, HL_1GID_003 | HL_361D_001 | HL_4M6D_004, HL_4M4O_001 |
| HL_76766.4 Compare | HL_361D_001 | HL_1GID_006, HL_1GID_003 | HL_3EPH_002, HL_2ZM5_002 |
Coloring options: