Motif HL_42733.4 Version HL_42733.4 of this group appears in releases 3.54 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_012 | 5J7L | 0.4425 | 1 | AA | SSU rRNA | G | 462 | U | 463 | U | 464 | A | 465 | A | 466 | A | 468 | C | 469 | C | 470 | cWW | |||
| 2 | HL_4WF9_039 | 4WF9 | 0.0000 | 1 | X | LSU rRNA | A | 1673 | U | 1674 | G | 1675 | A | 1676 | G | 1677 | A | 1679 | U | 1680 | U | 1681 | cWW | cwW | ntSH | |
| 3 | HL_1QTQ_002 | 1QTQ | 0.9437 | 1 | B | tRNA | A | 931 | U | 932 | U | 933 | C | 934 | U | 935 | A | 937 | U | 938 | U | 939 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAUACC | 1 |
| AUGAGAAUU | 1 |
| AUUCUGAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAUAC | 1 |
| UGAGAAU | 1 |
| UUCUGAU | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWW-tSH-R-R
- Heat map statistics
- Min 0.44 | Avg 0.53 | Max 1.00
Coloring options: