Motif HL_43355.1 Version HL_43355.1 of this group appears in releases 3.12 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4IOA_016 | 4IOA | 0.7730 | 3 | X | LSU rRNA | C | 552 | C | 553 | A | 556 | U | 557 | C | 559 | G | 560 | cWW | ncWB | |
| 2 | HL_5J7L_151 | 5J7L | 0.0000 | 1 | DA | LSU rRNA | C | 611 | G | 612 | A | 613 | A | 614 | A | 616 | G | 617 | cWW | tSH | |
| 3 | HL_4V9F_019 | 4V9F | 0.6668 | 1 | 0 | LSU rRNA | G | 670 | A | 671 | G | 672 | U | 673 | U | 675 | C | 676 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUAUGCG | 1 |
| CGAAUAG | 1 |
| GAGUAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUAUGC | 1 |
| GAAUA | 1 |
| AGUAU | 1 |
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