Motif HL_44740.1 Version HL_44740.1 of this group appears in releases 4.0 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 3-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S03_002 | 1S03 | 0.0000 | 1 | B | 47-MER | A | 22 | G | 23 | G | 24 | C | 25 | A | 26 | A | 27 | U | 29 | cWW | ntSH |
| 2 | HL_8P9A_233 | 8P9A | 0.8056 | 1 | AR | LSU rRNA | C | 2567 | C | 2568 | U | 2570 | U | 2571 | C | 2572 | G | 2573 | G | 2574 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGCAAUU | 1 |
| CCAUUCGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCAAU | 1 |
| CAUUCG | 1 |
Release history
| Release | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|
| Date | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.81 | Avg 0.40 | Max 0.81
Coloring options: