Motif HL_46794.1 Version HL_46794.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 4-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1Y0Q_008 | 1Y0Q | 0.0000 | 1 | A | G | 224 | A | 225 | G | 226 | U | 227 | A | 229 | C | 230 | G | 231 | A | 232 | A | 233 | C | 234 | cWW | ncwW | ntSHa |
| 2 | HL_3O58_028 | 3O58 | 0.3039 | 0 | 1 | G | 1266 | U | 1267 | G | 1268 | U | 1269 | A | 1270 | A | 1271 | C | 1272 | A | 1273 | A | 1274 | C | 1275 | cWW | ncWW | |
| 3 | HL_2XZM_014 | 2XZM | 0.8421 | 1 | A | G | 514 | U | 515 | G | 516 | U | 517 | A | 519 | A | 520 | U | 521 | C | 522 | U | 523 | C | 524 | cWW | ncwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUAACGAAC | 1 |
| GUGUAACAAC | 1 |
| GUGUAAAUCUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUAACGAA | 1 |
| UGUAACAA | 1 |
| UGUAAAUCU | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_46794.1 | Only in the child motif |
|---|---|---|---|
| HL_46794.2 Compare | HL_2XZM_014, HL_1Y0Q_008 | HL_3O58_028 | HL_2XZM_026 |
Coloring options: