Motif HL_49425.1 Version HL_49425.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5VOE_001 | 5VOE | 0.0000 | 2 | A | Aptamer 11F7t (36-MER) | G | 15 | A | 16 | UFT | 17 | A | 19 | UFT | 20 | CFL | 22 | cWW | cWH |
| 2 | HL_9AXU_016 | 9AXU | 0.8560 | 1 | 2 | LSU rRNA | C | 759 | C | 760 | U | 761 | U | 762 | G | 763 | G | 765 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GA(UFT)AA(UFT)A(CFL) | 1 |
| CCUUGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A(UFT)AA(UFT)A | 1 |
| CUUGU | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.86 | Avg 0.43 | Max 0.86
Coloring options: