Motif HL_50006.2 Version HL_50006.2 of this group appears in releases 3.96 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4KJI_001 | 4KJI | 0.5339 | 4 | C | RsmZ-2 | G | 5 | A | 6 | A | 10 | C | 12 | cWW | |
| 2 | HL_5HR6_002 | 5HR6 | 0.0762 | 5 | C | tRNA | C | 31 | C | 32 | C | 36 | G | 39 | cWW | ntSW |
| 3 | HL_5HR7_005 | 5HR7 | 0.0000 | 5 | D | tRNA | C | 31 | C | 32 | C | 36 | G | 39 | cWW | ntSW |
| 4 | HL_7D81_001 | 7D81 | 0.4472 | 2 | A | nadA RNA | C | 26 | G | 27 | A | 30 | G | 31 | cWW | |
| 5 | HL_8CRE_195 | 8CRE | 0.4907 | 2 | CM | SSU rRNA | C | 228 | U | 229 | G | 232 | G | 233 | cWW | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUUCACG | 2 |
| GAAGGAUC | 1 |
| CGAAAG | 1 |
| CUUCGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUCAC | 2 |
| AAGGAU | 1 |
| GAAA | 1 |
| UUCG | 1 |
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