Motif HL_50537.5 Version HL_50537.5 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | 2-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3KFU_005 | 3KFU | 0.2747 | 3 | L | tRNA | G | 31 | C | 32 | U | 35 | U | 36 | A | 38 | C | 39 | cWW | cWW | ncWw |
| 2 | HL_4WJ4_002 | 4WJ4 | 0.0000 | 3 | B | tRNA | A | 31 | C | 32 | U | 35 | U | 36 | A | 38 | U | 39 | cWW | ncWW | |
| 3 | HL_1IL2_002 | 1IL2 | 0.3422 | 3 | C | tRNA | C | 931 | PSU | 932 | U | 935 | C | 936 | C | 938 | G | 939 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCUGUUAAC | 1 |
| ACUGUUAAU | 1 |
| CUGUCCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGUUAA | 2 |
| (PSU)UGUC(1MG)C | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-F-F
- Heat map statistics
- Min 0.27 | Avg 0.24 | Max 0.47
Coloring options: