Motif HL_57052.3 Version HL_57052.3 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4LFB_005 | 4LFB | 0.1422 | 2 | Mini UNCG | A | SSU rRNA | C | 201 | U | 203 | G | 216 | cWW |
| 2 | HL_6MSF_002 | 6MSF | 0.0977 | 2 | Mini UNCG | S | RNA (10-mer) | G | 6||||P_1 | C | 8||||P_1 | C | 10||||P_1 | cWW |
| 3 | HL_6MSF_001 | 6MSF | 0.0000 | 2 | Mini UNCG | R | RNA (14-mer) | G | 6||||P_1 | C | 8||||P_1 | C | 10||||P_1 | cWW |
| 4 | HL_4YAZ_004 | 4YAZ | 0.2080 | 2 | Mini UNCG | R | Cyclic di-GMP-I riboswitch | C | 56 | C | 58 | G | 60 | cWW |
| 5 | HL_4L8H_001 | 4L8H | 0.4491 | 2 | Mini UNCG | R | RNA operator hairpin | C | 9 | A | 11 | G | 13 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCAC | 2 |
| CUUUG | 1 |
| CCCUG | 1 |
| CUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCA | 2 |
| UUU | 1 |
| CCU | 1 |
| UAA | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG (5)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.10 | Avg 0.23 | Max 0.50
Coloring options: