Motif HL_60358.1 Version HL_60358.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6MJ0_005 | 6MJ0 | 0.0000 | 1 | A | tRNA-like 3' UTR element | G | 88 | A | 89 | G | 90 | G | 91 | G | 92 | U | 93 | A | 95 | U | 96 | C | 97 | ncWW | ncSH | |
| 2 | HL_5NWQ_001 | 5NWQ | 0.8917 | 1 | A | Guanidine-III riboswitch | C | 20 | C | 21 | C | 22 | G | 23 | G | 24 | U | 25 | A | 27 | G | 28 | G | 29 | cWW | ncsS | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGGGUCAUC | 1 |
| CCCGGUCAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGGUCAU | 1 |
| CCGGUCAG | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.89 | Avg 0.45 | Max 0.89
Coloring options: