Motif HL_60499.1 Version HL_60499.1 of this group appears in releases 4.1 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-5 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6QN3_002 | 6QN3 | 0.0000 | 1 | A | Glutamine-II | U | 32 | A | 33 | G | 35 | G | 36 | A | 37 | A | 38 | C | 39 | G | 40 | G | 41 | G | 42 | A | 43 | cWW | cWW | cWH |
| 2 | HL_6QN3_004 | 6QN3 | 0.1090 | 1 | B | Glutamine-II | U | 32 | A | 33 | G | 35 | G | 36 | A | 37 | A | 38 | C | 39 | G | 40 | G | 41 | G | 42 | A | 43 | cWW | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGGGAACGGGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGGAACGGG | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cWH-F-F-F-F-F
- Heat map statistics
- Min 0.11 | Avg 0.05 | Max 0.11
Coloring options: