Motif HL_60563.1 Version HL_60563.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1U63_002 | 1U63 | 0.5591 | 3 | D | G | 20 | A | 22 | C | 25 | cWW | |
| 2 | HL_6CZR_234 | 6CZR | 0.0000 | 2 | Mini UNCG | 1a | C | 208 | U | 210 | G | 212 | ncWW |
| 3 | HL_5CCB_002 | 5CCB | 0.7205 | 2 | N | U | 33 | U | 35 | A | 37 | cWW | |
| 4 | HL_6GSK_219 | 6GSK | 0.8318 | 6 | T-loop related | 3L | G | 53 | U | 54 | C | 61 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAACUC | 1 |
| CUUUG | 1 |
| UUUUA | 1 |
| GUUCGAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUU | 2 |
| AACU | 1 |
| UUCGAAU | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Mini UNCG (1)
- T-loop related (1)
- Basepair signature
- cWW-F
- Heat map statistics
- Min 0.50 | Avg 0.63 | Max 1.44
Coloring options: