Motif HL_60707.1 Version HL_60707.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V88_197 | 4V88 | 0.3193 | 4 | A6 | SSU rRNA | U | 450 | A | 451 | A | 456 | cWW | |
| 2 | HL_2ZNI_001 | 2ZNI | 0.1499 | 4 | C | bacterial tRNA | C | 13 | G | 14 | G | 21 | cWW | |
| 3 | HL_2BH2_002 | 2BH2 | 0.1816 | 6 | D | 23S RIBOSOMAL RNA 1932-1968 | G | 1949 | G | 1950 | C | 1957 | cWW | |
| 4 | HL_6DTD_001 | 6DTD | 0.0000 | 4 | C | RNA (37-MER) | C | 16 | U | 17 | G | 22 | cWW | |
| 5 | HL_3IWN_002 | 3IWN | 0.1731 | 9 | A | C-di-GMP riboswitch | C | 57 | A | 58 | G | 68 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAAUUCA | 1 |
| CGAAUAG | 1 |
| GGUAAGUUC | 1 |
| CUUUUUG | 1 |
| CAUUGCACUCCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUUC | 1 |
| GAAUA | 1 |
| GUAAGUU | 1 |
| UUUUU | 1 |
| AUUGCACUCC | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, > 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: