Motif HL_61409.1 Version HL_61409.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1XOK_001 | 1XOK | 0.0000 | 3 | A | alfalfa mosaic virus RNA 3' UTR | G | 851 | U | 858 | G | 859 | C | 860 | cWW |
| 2 | HL_3O58_045 | 3O58 | 0.9685 | 1 | 1 | 25S ribosomal RNA | G | 2110 | U | 2112 | A | 2113 | C | 2114 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCACUGC | 1 |
| GGUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CACUG | 1 |
| GUA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_61409.1 | Only in the child motif |
|---|---|---|---|
| HL_38227.2 Compare | HL_3O58_045 | HL_1XOK_001 | HL_2PJP_001, HL_2PLY_002, HL_2PLY_001 |
Coloring options: