#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-82-72-8
1 HL_2DER_0052DER0.40661 DtRNAC31C32U33U35C36A37C38G39cWWntSW
2 HL_4WF9_0644WF90.18931 X LSU rRNAA2839A2841G2842A2843U2844G2845A2846U2847cWWcSW
3 HL_7A0S_0677A0S0.14701 X LSU rRNAG2794A2796G2797A2798C2799C2800A2801C2802cWWcSW
4 HL_8VTW_0678VTW0.13271 1A LSU rRNAG2819A2821G2822A2823C2824C2825A2826C2827cWWcSW
5 HL_5J7L_2015J7L0.00001 DA LSU rRNAG2819A2821G2822A2823C2824G2825A2826C2827cWWcSW
6 HL_8C3A_0718C3A0.14881 1 LSU rRNAG3268A3270U3271A3272C3273G3274A3275C3276cWWcSW
7 HL_5TBW_0705TBW0.17271 1 LSU rRNAG3303A3305U3306A3307C3308G3309A3310C3311cWWcSW
8 HL_4V9F_0694V9F0.20331 0 LSU rRNAG2836A2838C2839A2840A2841G2842A2843C2844cWWcSW
9 HL_5TBW_0285TBW0.54892 1 LSU rRNAG1266U1267G1268U1269C1272A1273A1274C1275cWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAAGACCAC2
CCUUUCACG1
AAAGAUGAU1
GAAGACGAC1
GCAUACGAC1
GUAUACGAC1
GUACAAGAC1
GUGUAACAAC1
Non-Watson-Crick part of the motif
SequenceCounts
AAGACCA2
CUUUCAC1
AAGAUGA1
AAGACGA1
CAUACGA1
UAUACGA1
UACAAGA1
UGUAACAA1

Release history

Release3.87
Date2024-08-14
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cSW-F-F-F-F
Heat map statistics
Min 0.09 | Avg 0.29 | Max 0.67
Help

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