Motif HL_65249.1 Version HL_65249.1 of this group appears in releases 1.8 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1Y0Q_005 | 1Y0Q | 0.0000 | 0 | A | C | 146 | A | 147 | A | 148 | G | 149 | U | 150 | G | 151 | cWW | ncsS |
| 2 | HL_4A1B_004 | 4A1B | 0.9742 | 1 | 1 | G | 130 | G | 131 | C | 133 | A | 134 | A | 135 | C | 136 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAGUG | 1 |
| GGUCAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGU | 1 |
| GUCAA | 1 |
Release history
| Release | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 |
|---|---|---|---|---|---|---|---|
| Date | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_65249.1 | Only in the parent motif |
|---|---|---|---|
| HL_75575.1 Compare | HL_1Y0Q_005 | HL_4A1B_004 | HL_2QBG_053 |
| HL_71607.1 Compare | HL_4A1B_004 | HL_1Y0Q_005 |
Children motifs
| Child motif | Common motif instances | Only in HL_65249.1 | Only in the child motif |
|---|---|---|---|
| HL_65249.2 Compare | HL_1Y0Q_005, HL_4A1B_004 | HL_4CUX_012 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.97 | Avg 0.49 | Max 0.97
Coloring options: