Motif HL_67835.1 Version HL_67835.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6NWY_033 | 6NWY | 0.3465 | 7 | tRNA D-loop | QV | tRNA | C | 13 | A | 14 | G | 15 | G | 22 | cWW |
| 2 | HL_2ZZN_004 | 2ZZN | 0.0000 | 5 | tRNA D-loop | D | tRNA | U | 13 | A | 14 | G | 15 | A | 22 | cWW |
| 3 | HL_6UFM_001 | 6UFM | 0.1727 | 7 | tRNA D-loop | A | tRNA | C | 13 | A | 14 | G | 15 | G | 23 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCCUGGUAG | 1 |
| UAGGGGCUA | 1 |
| CAGGCGGUUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCCUGGUA | 1 |
| AGGGGCU | 1 |
| AGGCGGUUA | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA D-loop (3)
- Basepair signature
- cWW-F-F
- Heat map statistics
- Min 0.17 | Avg 0.28 | Max 0.73
Coloring options: