Motif HL_68529.2 Version HL_68529.2 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4KR9_001 | 4KR9 | 0.7436 | 3 | Mini UNCG | M | RNA (39-MER) | G | 10 | U | 13 | C | 15 | ncWW |
| 2 | HL_5T16_002 | 5T16 | 0.0000 | 3 | Mini UNCG | H | RNA substrate analog | G | 16 | U | 19 | C | 21 | cWW |
| 3 | HL_4OOG_001 | 4OOG | 0.9990 | 3 | Mini UNCG | D | 34-mer RNA | G | 14 | U | 17 | C | 19 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUCC | 2 |
| GUGUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUC | 2 |
| UGUC | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG (3)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.74 | Avg 0.62 | Max 1.03
Coloring options: