Motif HL_72152.1 Version HL_72152.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2Y9H_005 | 2Y9H | 0.8852 | 3 | J | RNA (19-mer) | A | 10 | C | 11 | G | 12 | G | 16 | U | 17 | cWW | ncWH | |
| 2 | HL_1OOA_001 | 1OOA | 0.0000 | 1 | C | RNA aptamer | U | 13 | G | 14 | U | 15 | A | 17 | G | 18 | cWW | ntSH | |
| 3 | HL_4V99_025 | 4V99 | 0.8353 | 1 | C2 | RNA (17-mer) | A | 6 | U | 7 | U | 8 | U | 10 | U | 11 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACGCGUGU | 1 |
| UGUAAG | 1 |
| AUUUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGCGUG | 1 |
| GUAA | 1 |
| UUUU | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: