Motif HL_72714.2 Version HL_72714.2 of this group appears in releases 3.48 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-5 | 7-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7A0S_002 | 7A0S | 0.7570 | 0 | X | LSU rRNA | C | 85 | U | 86 | G | 87 | G | 88 | A | 89 | G | 90 | A | 91 | U | 92 | A | 93 | C | 94 | G | 95 | cWW | ncWW | ncSH | ||
| 2 | HL_6QN3_004 | 6QN3 | 0.0000 | 1 | B | Glutamine-II | U | 32 | A | 33 | G | 35 | G | 36 | A | 37 | A | 38 | C | 39 | G | 40 | G | 41 | G | 42 | A | 43 | cWW | cWW | cWH | ||
| 3 | HL_6QN3_002 | 6QN3 | 0.0966 | 1 | A | Glutamine-II | U | 32 | A | 33 | G | 35 | G | 36 | A | 37 | A | 38 | C | 39 | G | 40 | G | 41 | G | 42 | A | 43 | cWW | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGGGAACGGGA | 2 |
| CUGGAGAUACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGGAACGGG | 2 |
| UGGAGAUAC | 1 |
Release history
| Release | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWW-R-R-R-R-cWH-R
- Heat map statistics
- Min 0.10 | Avg 0.36 | Max 0.77
Coloring options: