#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 91-92-83-5
1 HL_5J7L_1345J7L0.61611DA LSU rRNAU59G60U62A63A64U65C66U67G68cWWncSH
2 HL_5X2G_0025X2G0.00002BsgRNAG54U55U57G58C59G60G61G62C64cWWncSH
3 HL_2JLT_0012JLT0.76901AR06G5G6C8C9C10A11G12A13C14cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGCUAAUCUG1
GUUUGCGGGAC1
GGUCCCAGAC1
Non-Watson-Crick part of the motif
SequenceCounts
GCUAAUCU1
UUUGCGGGA1
GUCCCAGA1

Release history

Release3.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-R-R-R-cSH-R
    Heat map statistics
    Min 0.62 | Avg 0.48 | Max 0.77
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