#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_4V9K_0334V9K0.54546 AW tRNAC13A14G15A21G22cWW
2 HL_4V90_0324V900.00005 AV tRNAC13A14G15A21G22cWWncWS
3 HL_6JXM_0016JXM0.24184 B tRNAC13A14G15A20G21cWWncWS

3D structures

Complete motif including flanking bases
SequenceCounts
CAGUUGGUUAG1
CAGCCGGUAG1
CAGUGGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
AGUUGGUUA1
AGCCGGUA1
AGUGGUA1

Release history

Release3.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cWS-R
Heat map statistics
Min 0.24 | Avg 0.30 | Max 0.56
Help

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3293 s