#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 71-72-6
1 HL_3U5H_0383U5H0.688205G1719U1720U1721U1722A1723U1724C1725cWWcwW
2 HL_3R4F_0013R4F0.24611T-loop relatedAA24U25U26G27A28U30U31cWWcwW
3 HL_2AW7_0252AW70.19621AG1089U1090U1091A1092A1093U1095C1096cWWcwW
4 HL_1FJG_0251FJG0.18531T-loop related (H)AG1089U1090U1091A1092A1093U1095C1096cWWcwW
5 HL_2XZM_0282XZM0.00001AG1281U1282U1283A1284A1285U1287C1288cWWcwW
6 HL_3U5F_0303U5F0.217916C1309U1310U1311A1312A1313U1315G1316cWWcwW
7 HL_3U5H_0243U5H0.262915C1076U1077U1078A1079A1080U1082G1083cWWcwW
8 HL_4A1B_0254A1B0.389711C1104U1105U1106A1107A1108U1110G1111cWWcwW

3D structures

Complete motif including flanking bases
SequenceCounts
GUUAAGUC2
CUUAAUUG2
GUUUAUC1
AUUGAGUU1
GUUAAUUC1
CUUAAAUG1
Non-Watson-Crick part of the motif
SequenceCounts
UUAAUU3
UUAAGU2
UUUAU1
UUGAGU1
UUAAAU1

Release history

Release0.50.60.70.81.01.11.21.31.4
Date2013-02-172013-02-172013-02-172013-02-172013-03-042013-04-062013-05-042013-06-012013-07-03
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in HL_82294.2Only in the child motif
HL_82294.3
Compare
HL_3U5H_024, HL_3U5F_030, HL_4A1B_025, HL_3U5H_038, HL_1FJG_025, HL_2AW7_025, HL_3R4F_001HL_2XZM_028HL_4BPP_029
Annotations
  • (6)
  • T-loop related (H) (1)
  • T-loop related (1)
  • Basepair signature
    cWW-cWW-tSH-R
    Heat map statistics
    Min 0.14 | Avg 0.33 | Max 0.71
    Help

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