Motif HL_83315.1 Version HL_83315.1 of this group appears in releases 3.62 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2DER_005 | 2DER | 0.0000 | 1 | D | tRNA | C | 31 | C | 32 | U | 33 | U | 35 | C | 36 | A | 37 | C | 38 | G | 39 | cWW | ||
| 2 | HL_3RG5_006 | 3RG5 | 0.7765 | 1 | tRNA anticodon loop | B | Selenocysteine transfer RNA | G | 31 | C | 32 | U | 33 | C | 35 | A | 36 | A | 37 | A | 38 | C | 39 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUUCACG | 1 |
| GCUUCAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUCAC | 1 |
| CUUCAAA | 1 |
Release history
| Release | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- tRNA anticodon loop (1)
- Basepair signature
- cWW-cWW-R-R-R
- Heat map statistics
- Min 0.78 | Avg 0.39 | Max 0.78
Coloring options: