Motif HL_87266.1 Version HL_87266.1 of this group appears in releases 4.1 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-8 | 3-4 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4PKD_002 | 4PKD | 0.0000 | 2 | V | U1 snRNA stem-loops 1 and 2 (55-MER) | U | 92 | A | 94 | U | 95 | C | 96 | C | 98 | G | 99 | A | 100 | A | 101 | G | 102 | G | 103 | cWW | tWH | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAUCACGAAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAUCACGAAG | 1 |
Release history
| Release | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 |
|---|---|---|---|---|---|---|---|
| Date | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tWH-F-cSH-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: