Motif HL_87834.1 Version HL_87834.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_5U3G_003 | 5U3G | 0.0000 | 2 | B | Guanidine-I riboswitch | G | 68 | A | 69 | A | 71 | A | 72 | A | 73 | A | 74 | C | 76 | cWW | tHH |
2 | HL_8VTW_042 | 8VTW | 0.5773 | 0 | 1A | LSU rRNA | U | 1720 | G | 1721 | A | 1722 | U | 1739 | G | 1740 | A | 1741 | G | 1742 | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAAAAAAGC | 1 |
UGAUGAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AAAAAAG | 1 |
GAUGA | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.58 | Avg 0.29 | Max 0.58
Coloring options: