Motif HL_89082.1 Version HL_89082.1 of this group appears in releases 3.2 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 4-6 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3EGZ_003 | 3EGZ | 0.0000 | 2 | B | Tetracycline aptamer and artificial riboswitch | G | 12||||2_565 | A | 13||||2_565 | A | 14||||2_565 | G | 15||||2_565 | A | 16||||2_565 | U | 18||||2_565 | A | 19||||2_565 | C | 20||||2_565 | A | 22||||2_565 | C | 23||||2_565 | C | 24||||2_565 | cWW | ncWWa | ntSW |
| 2 | HL_3EGZ_007 | 3EGZ | 0.0000 | 2 | B | Tetracycline aptamer and artificial riboswitch | G | 12||||4_455 | A | 13||||4_455 | A | 14||||4_455 | G | 15||||4_455 | A | 16||||4_455 | U | 18||||4_455 | A | 19||||4_455 | C | 20||||4_455 | A | 22||||4_455 | C | 23||||4_455 | C | 24||||4_455 | cWW | ncWWa | ntSW |
| 3 | HL_3EGZ_005 | 3EGZ | 0.0000 | 2 | B | Tetracycline aptamer and artificial riboswitch | G | 12||||3_555 | A | 13||||3_555 | A | 14||||3_555 | G | 15||||3_555 | A | 16||||3_555 | U | 18||||3_555 | A | 19||||3_555 | C | 20||||3_555 | A | 22||||3_555 | C | 23||||3_555 | C | 24||||3_555 | cWW | ncWWa | ntSW |
| 4 | HL_3EGZ_001 | 3EGZ | 0.0000 | 2 | B | Tetracycline aptamer and artificial riboswitch | G | 12 | A | 13 | A | 14 | G | 15 | A | 16 | U | 18 | A | 19 | C | 20 | A | 22 | C | 23 | C | 24 | cWW | ncWWa | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAGAAUACGACC | 4 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGAAUACGAC | 4 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: